STRINGSTRING
Acin_1679 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1679" - Peptidase M48 in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1679Peptidase M48 (366 aa)    
Predicted Functional Partners:
Acin_1678
Methyltransferase fkbM (355 aa)
              0.829
Acin_1774
Surface antigen (699 aa)
 
   
  0.709
Acin_0431
Hypothetical protein (631 aa)
   
          0.699
tolC
Outer membrane efflux protein (439 aa)
 
   
  0.688
Acin_1680
Hypothetical protein (165 aa)
              0.601
Acin_2225
Acriflavin resistance protein (386 aa)
   
   
  0.585
Acin_2224
Hypothetical protein (1045 aa)
   
        0.558
Acin_1775
Hypothetical protein (1439 aa)
   
          0.532
Acin_1677
Hypothetical protein (337 aa)
              0.519
Acin_0810
TonB-dependent receptor (474 aa)
   
          0.518
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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