Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acin_0192 | Acin_0193 | Acin_0192 | Acin_0193 | DNA-binding response regulator; COG0745. | Two-component system sensor histidine kinase. | 0.958 |
Acin_0192 | arcB | Acin_0192 | Acin_1707 | DNA-binding response regulator; COG0745. | Two-component system sensor histidine kinase and response regulator. | 0.958 |
Acin_0192 | phoR-2 | Acin_0192 | Acin_2040 | DNA-binding response regulator; COG0745. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.841 |
Acin_0193 | Acin_0192 | Acin_0193 | Acin_0192 | Two-component system sensor histidine kinase. | DNA-binding response regulator; COG0745. | 0.958 |
Acin_0193 | Acin_1079 | Acin_0193 | Acin_1079 | Two-component system sensor histidine kinase. | Two-component system transcriptional regulator; COG0745. | 0.862 |
Acin_0193 | Acin_2433 | Acin_0193 | Acin_2433 | Two-component system sensor histidine kinase. | DNA-binding response regulator; COG0745. | 0.868 |
Acin_0193 | arcB | Acin_0193 | Acin_1707 | Two-component system sensor histidine kinase. | Two-component system sensor histidine kinase and response regulator. | 0.885 |
Acin_0193 | baeR | Acin_0193 | Acin_1686 | Two-component system sensor histidine kinase. | Two-component system transcriptional regulator; COG0745. | 0.863 |
Acin_0193 | crt | Acin_0193 | Acin_0722 | Two-component system sensor histidine kinase. | enoyl-CoA hydratase/carnithine racemase; COG1024; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.467 |
Acin_0193 | phoB | Acin_0193 | Acin_2041 | Two-component system sensor histidine kinase. | Two-component system transcriptional regulator; COG0745. | 0.868 |
Acin_0193 | resD | Acin_0193 | Acin_1292 | Two-component system sensor histidine kinase. | Two-component system transcriptional regulator; COG0745. | 0.865 |
Acin_0818 | arcB | Acin_0818 | Acin_1707 | Conserved hypothetical protein. | Two-component system sensor histidine kinase and response regulator. | 0.902 |
Acin_1079 | Acin_0193 | Acin_1079 | Acin_0193 | Two-component system transcriptional regulator; COG0745. | Two-component system sensor histidine kinase. | 0.862 |
Acin_1079 | arcB | Acin_1079 | Acin_1707 | Two-component system transcriptional regulator; COG0745. | Two-component system sensor histidine kinase and response regulator. | 0.960 |
Acin_1079 | phoR-2 | Acin_1079 | Acin_2040 | Two-component system transcriptional regulator; COG0745. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.851 |
Acin_2433 | Acin_0193 | Acin_2433 | Acin_0193 | DNA-binding response regulator; COG0745. | Two-component system sensor histidine kinase. | 0.868 |
Acin_2433 | arcB | Acin_2433 | Acin_1707 | DNA-binding response regulator; COG0745. | Two-component system sensor histidine kinase and response regulator. | 0.952 |
Acin_2433 | phoR-2 | Acin_2433 | Acin_2040 | DNA-binding response regulator; COG0745. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.847 |
arcB | Acin_0192 | Acin_1707 | Acin_0192 | Two-component system sensor histidine kinase and response regulator. | DNA-binding response regulator; COG0745. | 0.958 |
arcB | Acin_0193 | Acin_1707 | Acin_0193 | Two-component system sensor histidine kinase and response regulator. | Two-component system sensor histidine kinase. | 0.885 |
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