STRINGSTRING
pcaC protein (Acidaminococcus intestini) - STRING interaction network
"pcaC" - annotation not available in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaCannotation not available (276 aa)    
Predicted Functional Partners:
Acin_1752
Carboxymuconolactone decarboxylase; COG1917 (168 aa)
          0.967
Acin_2428
Uncharacterized protein; COG1917 (256 aa)
          0.942
purB
Adenylosuccinate lyase; COG0015; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (430 aa)
   
 
  0.913
Acin_1753
NADPH-dependent FMN reductase; COG0655 (215 aa)
              0.803
Acin_1755
Transcriptional regulator; COG0789 (150 aa)
 
          0.730
Acin_0671
Flavodoxin; COG0716 (209 aa)
 
          0.522
Acin_1748
annotation not available (214 aa)
 
          0.517
Acin_0670
annotation not available (162 aa)
 
          0.507
Acin_1744
Uncharacterized protein; COG1073 (387 aa)
 
          0.481
Acin_0605
annotation not available (298 aa)
 
          0.475
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
Server load: low (10%) [HD]