STRINGSTRING
Acin_1782 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1782" - Exopolysaccharide biosynthesis protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1782Exopolysaccharide biosynthesis protein (470 aa)    
Predicted Functional Partners:
Acin_0733
Outer membrane protein M1 (449 aa)
   
          0.727
Acin_2437
Outer membrane protein M1 (423 aa)
   
          0.726
Acin_0732
Outer membrane protein M1 (428 aa)
   
          0.695
Acin_2296
Hypothetical protein (327 aa)
 
          0.655
Acin_2288
Outer membrane protein M1 (417 aa)
   
          0.650
Acin_1783
Cell shape determining protein mreB (346 aa)
              0.649
murA
UDP-N-acetylglucosamine1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (419 aa)
              0.645
Acin_1781
Hypothetical protein (105 aa)
              0.633
Acin_2376
Major envelope protein (416 aa)
   
          0.625
Acin_0570
O-antigen polymerase (416 aa)
 
          0.606
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (3%) [HD]