STRINGSTRING
Acin_1802 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1802" - Mate family multi antimicrobial extrusion protein in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1802Mate family multi antimicrobial extrusion protein (451 aa)    
Predicted Functional Partners:
Acin_1694
Hypothetical protein (449 aa)
   
     
  0.636
Acin_1803
Hypothetical protein (678 aa)
              0.596
Acin_1804
Diacylglycerol kinase (315 aa)
              0.588
Acin_1066
MATE efflux family protein (448 aa)
   
     
  0.562
Acin_1805
Hypothetical protein (115 aa)
              0.490
Acin_0513
phoH family protein (333 aa)
       
      0.474
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (288 aa)
 
   
  0.434
cinA
Competence/damage-inducible protein cinA (413 aa)
 
   
  0.418
Acin_1806
Hypothetical protein (77 aa)
              0.402
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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