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Acin_1860 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1860" - Hypothetical protein in Acidaminococcus intestini
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1860Hypothetical protein (367 aa)    
Predicted Functional Partners:
Acin_1859
Hypothetical protein (89 aa)
              0.829
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (754 aa)
 
   
  0.754
Acin_1265
Site-specific recombinase (357 aa)
   
          0.752
Acin_1406
Site-specific recombinase (355 aa)
   
          0.738
hisS
histidyl-tRNA synthetase (428 aa)
     
      0.484
rpoD
RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (582 aa)
       
      0.470
Acin_1858
Hypothetical protein (88 aa)
              0.455
polA
DNA polymerase I (873 aa)
         
  0.450
Acin_1984
Methylase (407 aa)
   
   
  0.424
Acin_1927
DNA methylase N-4/N-6 domain-containing protein (418 aa)
   
   
  0.424
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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