STRINGSTRING
Acin_1874 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1874" - Putative S-layer y domain-containing protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1874Putative S-layer y domain-containing protein (568 aa)    
Predicted Functional Partners:
Acin_0011
Hypothetical protein (155 aa)
   
          0.750
Acin_0497
Hypothetical protein (167 aa)
   
          0.738
Acin_0849
Hypothetical protein (397 aa)
   
          0.726
Acin_1546
Hypothetical protein (144 aa)
   
          0.706
Acin_0946
Hypothetical protein (245 aa)
   
          0.695
Acin_0636
Permease (362 aa)
   
          0.692
Acin_0558
Hypothetical protein (331 aa)
   
          0.685
Acin_1712
Hypothetical protein (370 aa)
   
          0.677
Acin_2159
Hypothetical protein (677 aa)
   
          0.673
Acin_0065
Sulfatase (636 aa)
   
          0.658
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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