STRINGSTRING
Acin_1876 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1876" - Site-specific recombinase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1876Site-specific recombinase (588 aa)    
Predicted Functional Partners:
Acin_1875
Site-specific recombinase (525 aa)
 
       
0.889
Acin_1877
Hypothetical protein (135 aa)
 
          0.757
polA
DNA polymerase I (873 aa)
       
 
  0.655
Acin_1927
DNA methylase N-4/N-6 domain-containing protein (418 aa)
 
 
  0.632
Acin_1352
Methylase (416 aa)
 
 
  0.621
Acin_1984
Methylase (407 aa)
 
 
  0.620
Acin_1314
Deoxyribose-phosphate aldolase (130 aa)
          0.563
Acin_1942
Hypothetical protein (770 aa)
 
 
      0.537
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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