STRINGSTRING
Acin_1926 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1926" - Virulence-like protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1926Virulence-like protein (268 aa)    
Predicted Functional Partners:
Acin_1928
Hypothetical protein (169 aa)
 
          0.904
Acin_1927
DNA methylase N-4/N-6 domain-containing protein (418 aa)
              0.745
Acin_1937
Hypothetical protein (139 aa)
 
          0.674
Acin_1994
Hypothetical protein (95 aa)
 
          0.653
Acin_1348
Hypothetical protein (203 aa)
 
          0.635
Acin_1981
Hypothetical protein (203 aa)
 
          0.629
Acin_1925
Hypothetical protein (302 aa)
 
       
0.628
Acin_1358
Hypothetical protein (96 aa)
 
          0.595
Acin_1922
Hypothetical protein (533 aa)
 
          0.576
Acin_2226
Hypothetical protein (530 aa)
   
          0.542
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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