STRINGSTRING
Acin_1934 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1934" - VRR-NUC domain-containing protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1934VRR-NUC domain-containing protein (87 aa)    
Predicted Functional Partners:
Acin_1997
DNA polymerase I (662 aa)
 
          0.854
Acin_1878
DNA-directed DNA polymerase (681 aa)
 
          0.854
Acin_1361
DNA polymerase I (665 aa)
 
          0.854
Acin_2000
Hypothetical protein (369 aa)
 
          0.854
Acin_1882
Hypothetical protein (325 aa)
 
          0.854
Acin_1364
Hypothetical protein (369 aa)
 
          0.854
Acin_1880
Hypothetical protein (187 aa)
 
          0.846
Acin_1999
Hypothetical protein (196 aa)
 
          0.845
Acin_1363
Hypothetical protein (188 aa)
 
          0.845
Acin_1991
Hypothetical protein (457 aa)
 
          0.844
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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