STRINGSTRING
Acin_1978 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1978" - Prophage protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1978Prophage protein (520 aa)    
Predicted Functional Partners:
Acin_1979
Phage terminase small subunit (142 aa)
 
     
  0.945
Acin_1976
Hypothetical protein (418 aa)
 
     
  0.851
Acin_1919
HK97 family portal protein (375 aa)
 
     
  0.851
Acin_1345
Hypothetical protein (429 aa)
 
     
  0.851
Acin_1347
Phage terminase small subunit (142 aa)
 
     
  0.801
Acin_1916
Hypothetical protein (398 aa)
 
          0.664
Acin_1974
Phage prohead protease (396 aa)
 
          0.662
Acin_1343
Phage prohead protease (396 aa)
 
          0.652
Acin_1333
Phage tail tape measure protein (706 aa)
 
          0.529
Acin_1964
Phage tail tape measure protein (706 aa)
 
          0.524
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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