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Acin_1979 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1979" - Phage terminase small subunit in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1979Phage terminase small subunit; COG3747 (142 aa)    
Predicted Functional Partners:
Acin_1978
Prophage protein; COG4626 (520 aa)
 
          0.884
Acin_1987
Phage holin; COG1403 (43 aa)
 
          0.794
Acin_1346
Phage terminase; COG4626 (857 aa)
 
          0.622
Acin_1877
annotation not available (135 aa)
 
        0.501
Acin_1345
Uncharacterized protein; COG4695 (429 aa)
 
          0.498
Acin_1976
Uncharacterized protein; COG4695 (418 aa)
 
          0.496
Acin_1980
annotation not available (127 aa)
              0.466
Acin_1314
annotation not available (130 aa)
 
        0.440
Acin_1983
annotation not available (285 aa)
          0.437
Acin_1350
annotation not available (287 aa)
          0.435
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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