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Acin_1996 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1996" - Phage regulatory protein rha in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1996Phage regulatory protein rha (224 aa)    
Predicted Functional Partners:
Acin_1995
Hypothetical protein (74 aa)
              0.869
Acin_1997
DNA polymerase I (662 aa)
              0.639
Acin_1994
Hypothetical protein (95 aa)
              0.631
Acin_1993
Prophage protein (747 aa)
              0.616
Acin_1403
Hypothetical protein (266 aa)
       
  0.589
Acin_2001
Hypothetical protein (103 aa)
 
          0.497
Acin_1926
Virulence-like protein (268 aa)
   
          0.456
Acin_1922
Hypothetical protein (533 aa)
   
          0.417
Acin_1992
Diacylglycerol kinase (102 aa)
              0.417
Acin_1990
Hypothetical protein (145 aa)
              0.409
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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