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Acin_2013 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2013" - HAD-superfamily hydrolase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2013HAD-superfamily hydrolase (222 aa)    
Predicted Functional Partners:
Acin_2227
FAD linked oxidase domain protein (473 aa)
       
  0.901
Acin_1812
FAD-linked oxidase (466 aa)
       
  0.901
Acin_0227
FAD-linked oxidase (467 aa)
       
  0.901
Acin_1668
Phosphoglycolate phosphatase (232 aa)
   
   
0.859
Acin_0607
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (119 aa)
     
      0.656
Acin_2012
Hypothetical protein (182 aa)
              0.625
polA
DNA polymerase I (873 aa)
   
   
  0.616
rpe
Ribulose-phosphate 3-epimerase (213 aa)
   
   
  0.581
pheA
Chorismate mutase (282 aa)
 
        0.573
trpS
tryptophanyl-tRNA synthetase (353 aa)
   
   
  0.479
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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