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Acin_2038 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2038" - Acetyltransferase in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2038Acetyltransferase (135 aa)    
Predicted Functional Partners:
Acin_0479
Hypothetical protein (153 aa)
   
  0.686
rpoN
RNA polymerase sigma-54 factor (466 aa)
 
          0.668
Acin_2037
Hypothetical protein (362 aa)
              0.547
gpsA
Isopentenyl-diphosphate delta-isomerase (331 aa)
   
      0.493
fumC
Fumarate hydratase (464 aa)
       
      0.467
rimM
16S rRNA processing protein rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (167 aa)
 
          0.402
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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