STRINGSTRING
Acin_2098 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2098" - Arsenical resistance repressor arsR in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2098Arsenical resistance repressor arsR (110 aa)    
Predicted Functional Partners:
Acin_2097
Arsenite efflux pump protein (354 aa)
         
  0.895
Acin_2099
Hypothetical protein (306 aa)
              0.604
Acin_1637
Thioredoxin reductase (558 aa)
   
   
  0.602
Acin_2100
Hypothetical protein (576 aa)
              0.588
polA
DNA polymerase I (873 aa)
         
  0.487
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (803 aa)
         
  0.461
Acin_0682
Phosphotyrosine protein phosphatase (166 aa)
   
   
  0.441
Acin_1409
Hypothetical protein (636 aa)
   
   
  0.439
Acin_0797
Hypothetical protein (923 aa)
   
   
  0.439
Acin_0240
Hypothetical protein (702 aa)
   
   
  0.439
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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