STRINGSTRING
Acin_2181 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2181" - Glycosyl transferase family protein in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2181Glycosyl transferase family protein (545 aa)    
Predicted Functional Partners:
Acin_0970
Glycosyl transferase family protein (322 aa)
 
   
  0.910
Acin_2180
Hypothetical protein (162 aa)
              0.834
Acin_1427
Hypothetical protein (313 aa)
 
   
  0.741
Acin_1703
Hypothetical protein (179 aa)
   
          0.630
kdtA
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (843 aa)
 
 
 
  0.603
Acin_2158
Glycosyl transferase family protein (247 aa)
 
   
  0.588
Acin_0497
Hypothetical protein (167 aa)
   
          0.575
Acin_0011
Hypothetical protein (155 aa)
   
          0.564
tolC
Outer membrane efflux protein (439 aa)
 
          0.562
Acin_0634
OstA family protein (282 aa)
   
          0.562
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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