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Acin_2223 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2223" - ABC transporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2223ABC transporter (576 aa)    
Predicted Functional Partners:
Acin_2222
Sodium-alanine symporter (447 aa)
              0.696
Acin_1055
Acetaldehyde dehydrogenase/alcohol dehydrogenase (405 aa)
     
        0.635
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (354 aa)
     
      0.529
Acin_2224
Hypothetical protein (1045 aa)
              0.525
pheT
phenylalanyl-tRNA synthetase subunit beta (811 aa)
     
        0.512
Acin_2225
Acriflavin resistance protein (386 aa)
              0.499
Acin_2221
Beta-lactamase (394 aa)
              0.439
msbA
ABC lipid A exporter (589 aa)
     
0.427
Acin_0804
ABC transporter (305 aa)
     
0.426
Acin_2227
FAD linked oxidase domain protein (473 aa)
     
      0.405
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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