STRINGSTRING
Acin_2263 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2263" - Beta-lactamase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2263Beta-lactamase (325 aa)    
Predicted Functional Partners:
Acin_2120
NAD(FAD)-dependent dehydrogenase (419 aa)
   
 
  0.957
Acin_2262
Hypothetical protein (178 aa)
              0.819
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (198 aa)
     
      0.753
Acin_2261
Hypothetical protein (43 aa)
              0.625
rpoD
RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (582 aa)
   
 
  0.514
apt
Adenine phosphoribosyltransferase (184 aa)
 
          0.471
Acin_2014
Pentapeptide repeat-containing protein (250 aa)
   
      0.437
Acin_0624
Hypothetical protein (408 aa)
 
        0.407
Acin_0687
Radical SAM family protein (161 aa)
 
 
      0.405
Acin_1632
Radical SAM family protein (172 aa)
 
 
      0.403
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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