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Acin_2277 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2277" - LysR family transcriptional regulator in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2277LysR family transcriptional regulator (308 aa)    
Predicted Functional Partners:
Acin_1740
Transcriptional regulator (294 aa)
 
     
  0.778
Acin_1053
Transcriptional regulator (281 aa)
   
          0.733
Acin_2276
Hypothetical protein (42 aa)
              0.674
dnaA
Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (458 aa)
     
 
  0.623
Acin_1637
Thioredoxin reductase (558 aa)
         
  0.603
Acin_1638
Hypothetical protein (187 aa)
         
  0.547
Acin_2278
Hypothetical protein (285 aa)
              0.529
Acin_2117
lysR-family transcriptional regulator (314 aa)
   
          0.512
Acin_1442
Hypothetical protein (303 aa)
   
          0.497
Acin_2279
Dicarboxylate carrier MatC domain-containing protein (437 aa)
              0.480
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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