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butA protein (Acidaminococcus intestini) - STRING interaction network
"butA" - Short-chain dehydrogenase/reductase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
butAShort-chain dehydrogenase/reductase (246 aa)    
Predicted Functional Partners:
crt
enoyl-CoA hydratase/carnithine racemase (262 aa)
         
    0.900
atoB
acetyl-CoA acetyltransferase (393 aa)
         
    0.900
Acin_2367
Branched-chain amino acid ABC transporter carrier protein; Component of the transport system for branched-chain amino acids (466 aa)
              0.776
Acin_2369
Cold-shock DNA-binding protein (65 aa)
              0.583
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (273 aa)
   
          0.497
Acin_2366
Hypothetical protein (201 aa)
              0.483
msbA
ABC lipid A exporter (589 aa)
   
          0.473
Acin_0804
ABC transporter (305 aa)
   
          0.426
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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