STRINGSTRING
Acin_2380 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2380" - Polysaccharide biosynthesis protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2380Polysaccharide biosynthesis protein (552 aa)    
Predicted Functional Partners:
Acin_2381
Hypothetical protein (47 aa)
              0.745
glnA
Glutamine synthetase (632 aa)
 
     
  0.684
Acin_1703
Hypothetical protein (179 aa)
   
          0.680
Acin_0839
Outer membrane chaperone Skp (161 aa)
   
          0.668
Acin_1713
Hypothetical protein (697 aa)
          0.667
Acin_1197
Hypothetical protein (78 aa)
   
          0.666
Acin_1773
Outer membrane chaperone Skp (162 aa)
   
          0.642
Acin_1712
Hypothetical protein (370 aa)
 
        0.641
Acin_2219
RNA polymerase (232 aa)
   
          0.620
Acin_0731
Hypothetical protein (413 aa)
   
          0.580
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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