STRINGSTRING
Acin_2398 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2398" - Multidrug RND transporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2398Multidrug RND transporter (370 aa)    
Predicted Functional Partners:
Acin_2399
Acriflavin resistance protein (1018 aa)
 
 
  0.979
Acin_0264
Hypothetical protein (404 aa)
 
 
  0.920
Acin_0879
Hypothetical protein (407 aa)
   
 
  0.884
tolC
Outer membrane efflux protein (439 aa)
 
 
  0.863
Acin_2397
Hypothetical protein (209 aa)
              0.859
Acin_2224
Hypothetical protein (1045 aa)
 
 
  0.805
Acin_0163
RND efflux system outer membrane lipoprotein (535 aa)
 
 
  0.791
Acin_0263
Antimicrobial peptide ABC transporter ATPase (227 aa)
 
 
  0.777
Acin_1580
ABC transporter (212 aa)
   
 
  0.710
Acin_0880
ABC transporter ATP-binding protein (222 aa)
   
 
  0.710
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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