STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG69472.1LruC domain-containing protein. (654 aa)    
Predicted Functional Partners:
SHG69406.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.886
SHG69517.1
Hypothetical protein.
 
     0.879
SHG69559.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
     0.879
SHG69388.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.877
SHG69537.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.867
SHG69323.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.860
SHG69342.1
Acetyltransferase (isoleucine patch superfamily).
 
     0.771
SHG69361.1
Glycosyl transferases group 1.
 
     0.768
SHG69494.1
Hypothetical protein.
 
     0.759
SHG69596.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
    0.682
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.