STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_076510Serine palmitoyl transferase subunit, putative. (471 aa)    
Predicted Functional Partners:
TVAG_388650
Aminotransferase, classes I and II family protein.
  
0.999
TVAG_468060
Oxidoreductase, short chain dehydrogenase/reductase family protein.
     
 0.991
TVAG_109540
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.937
TVAG_130270
Aminotran_1_2 domain-containing protein.
  
  
 
0.900
TVAG_150170
ORMDL family protein.
    
 
 0.892
TVAG_364550
ORMDL family protein.
    
 
 0.892
TVAG_228780
Alcohol dehydrogenase 1, putative.
  
 
 0.890
TVAG_454470
NADP-dependent alcohol dehydrogenase, putative.
  
 
 0.890
TVAG_344880
NADP-dependent alcohol dehydrogenase, putative.
  
 
 0.890
TVAG_047990
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.860
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.