STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_167010DNA repair helicase rad25 family protein. (740 aa)    
Predicted Functional Partners:
TVAG_212420
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
  
 0.996
TVAG_030750
Uncharacterized protein.
    
 0.995
TVAG_062000
Uncharacterized protein.
    
 0.994
TVAG_071030
Uncharacterized protein.
    
 0.993
TVAG_389350
TFIIE alpha subunit family protein.
   
 0.989
TVAG_100760
Transcription factor ssl1 family protein.
    
 0.980
TVAG_290240
Ssl1 domain-containing protein.
    
 0.980
TVAG_198720
Uncharacterized protein.
    
 0.979
TVAG_046610
XPG I-region family protein.
   
 0.973
TVAG_379530
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.967
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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