STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_261970Carbamate kinase, putative. (367 aa)    
Predicted Functional Partners:
TVAG_258770
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.999
TVAG_102540
Valyl tRNA Synthetase.
  
  
 0.943
TVAG_038530
Carbamoyl transferase Z4209, putative; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.930
TVAG_368740
Ornithine carbamoyltransferase family protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.930
TVAG_041310
Ornithine carbamoyltransferase family protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.930
TVAG_537400
OTCace domain-containing protein.
  
 
 0.930
TVAG_200610
Uncharacterized protein.
  
 
 0.920
TVAG_494040
Isocitrate dehydrogenase [NADP].
  
  
 0.904
TVAG_365520
Glucosamine-6-phosphate isomerase family protein.
     
 0.886
TVAG_324610
DALR anticodon binding domain containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
  0.880
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.