STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_187910PolyA polymerase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (454 aa)    
Predicted Functional Partners:
TVAG_311220
RNB-like protein; Belongs to the RNR ribonuclease family.
  
 0.842
TVAG_078570
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.685
TVAG_047990
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.667
TVAG_351910
RanBP1 domain containing protein.
  
   0.614
TVAG_080080
RanBP1 domain containing protein.
  
   0.614
TVAG_170370
Enolase, C-terminal TIM barrel domain containing protein.
  
 
 0.566
TVAG_464170
Enolase 4, putative.
  
 
 0.566
TVAG_282090
Enolase, putative.
  
 
 0.566
TVAG_329460
Enolase 2, putative.
  
 
 0.566
TVAG_487600
Enolase family protein.
  
 
 0.566
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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