STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_396780Small GTP-binding protein, putative. (192 aa)    
Predicted Functional Partners:
TVAG_392610
Variant SH3 domain containing protein.
   
 0.919
TVAG_394450
RhoGEF domain containing protein.
   
 0.906
TVAG_317480
RhoGEF domain containing protein.
   
 0.906
TVAG_100830
Uncharacterized protein.
   
 0.892
TVAG_106580
Uncharacterized protein.
   
 0.892
TVAG_394820
Uncharacterized protein.
   
 0.892
TVAG_370100
Uncharacterized protein.
   
 0.892
TVAG_468730
Uncharacterized protein.
   
 0.892
TVAG_408340
Uncharacterized protein.
   
 0.892
TVAG_360780
WD_REPEATS_REGION domain-containing protein.
   
 0.892
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.