STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_363680Cleavage and polyadenylation specificity factor subunit 2. (700 aa)    
Predicted Functional Partners:
TVAG_121040
WD repeat protein, putative.
    
 0.999
TVAG_077030
CPSF A subunit region family protein.
   
 0.999
TVAG_494090
Symplekin_C domain-containing protein.
   
 0.999
TVAG_463950
Fip1 motif family protein.
    
 0.999
TVAG_324910
RRM domain-containing protein.
   
 0.999
TVAG_437970
RNA-metabolising metallo-beta-lactamase family protein.
  
0.999
TVAG_229140
SSU72 protein-related protein.
   
 0.999
TVAG_327680
Uncharacterized protein.
   
 
 0.999
TVAG_265310
Eukaryotic translation initiation factor 3 subunit 1, putative.
    
 
 0.998
TVAG_094550
Uncharacterized protein.
   
 0.997
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.