STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_342930Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
TVAG_254350
Calponin-homology (CH) domain-containing protein.
    
 
 0.858
TVAG_135950
MGC84469 protein, putative.
  
 
 0.842
TVAG_186430
MGC84469 protein, putative.
  
 
 0.840
TVAG_348380
Flagellar protofilament ribbon protein, putative.
  
 
 0.837
TVAG_295210
DM10 domain-containing protein.
  
 
 0.835
TVAG_492260
MGC84469 protein, putative.
  
 
 0.835
TVAG_159140
MGC84469 protein, putative.
  
 
 0.835
TVAG_458790
DM10 domain-containing protein.
  
 
 0.834
TVAG_351880
DM10 domain-containing protein.
  
 
 0.822
TVAG_389400
DM10 domain-containing protein.
  
 
 0.822
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.