STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_257190NTF2 domain-containing protein. (128 aa)    
Predicted Functional Partners:
TVAG_351910
RanBP1 domain containing protein.
   
 0.999
TVAG_080080
RanBP1 domain containing protein.
   
 0.999
TVAG_327680
Uncharacterized protein.
    
 0.999
TVAG_179860
ATP-dependent RNA helicase p47, putative; Belongs to the DEAD box helicase family.
   
 
 0.926
TVAG_296260
Nuclear transport factor 2, putative.
   
 
 0.925
TVAG_229460
Nsp1_C domain-containing protein.
    
 0.882
TVAG_026300
RanBP1 domain containing protein.
   
 0.862
TVAG_151800
RanBP1 domain containing protein.
   
 0.862
TVAG_337260
RanBP1 domain containing protein.
   
 0.862
TVAG_303500
Nup54 domain-containing protein.
   
 
 0.857
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.