STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_053460Myb-like DNA-binding domain containing protein. (163 aa)    
Predicted Functional Partners:
TVAG_058790
WD_REPEATS_REGION domain-containing protein.
   
 0.609
TVAG_385620
WD_REPEATS_REGION domain-containing protein.
   
 0.609
TVAG_453660
Bromodomain containing protein.
   
 
 0.525
TVAG_292010
S1 RNA binding domain containing protein.
   
   0.525
TVAG_224340
Bromodomain containing protein.
   
 
 0.525
TVAG_243780
Clan MA, family M41, FtsH endopeptidase-like metallopeptidase; Belongs to the AAA ATPase family.
    
 
 0.512
TVAG_107660
40S ribosomal protein S29, putative.
    
 
 0.484
TVAG_005910
Ribosomal protein L8, putative.
    
 
 0.464
TVAG_083260
Ribosomal protein L22, putative; Belongs to the universal ribosomal protein uL22 family.
    
   0.459
TVAG_015800
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
   
   0.450
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.