STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_068970CK1 family protein kinase; Belongs to the protein kinase superfamily. (338 aa)    
Predicted Functional Partners:
TVAG_238920
Low temperature viability protein.
    
 0.853
TVAG_371700
Bystin, putative.
    
 0.829
TVAG_332390
RIO family atypical protein kinase.
    
 0.829
TVAG_423660
KIAA1401 protein, putative.
    
 0.827
TVAG_151710
Uncharacterized protein.
    
 0.819
TVAG_106800
Ribosomal protein S3, putative.
    
 0.767
TVAG_066030
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.702
TVAG_115500
KH domain containing protein.
    
 0.684
TVAG_303440
Uncharacterized protein.
    
 
 0.636
TVAG_028740
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
    
 
 0.632
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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