STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_270820Hydrolase, NUDIX family protein. (261 aa)    
Predicted Functional Partners:
TVAG_468220
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 0.959
TVAG_281550
Sm protein.
    
 0.929
TVAG_123170
Sm protein.
    
 0.907
TVAG_311220
RNB-like protein; Belongs to the RNR ribonuclease family.
   
 0.888
TVAG_392480
Sm protein.
    
 0.879
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.879
TVAG_303150
XRN 5'-3' exonuclease N-terminus family protein.
   
 0.867
TVAG_424140
XRN 5'-3' exonuclease N-terminus family protein.
   
 0.867
TVAG_060380
Uncharacterized protein.
   
 0.867
TVAG_318900
XRN 5'-3' exonuclease N-terminus family protein.
   
 0.867
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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