STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_385600Von Willebrand factor type A domain containing protein. (709 aa)    
Predicted Functional Partners:
TVAG_093310
Brix domain containing protein.
   
 
 0.813
TVAG_467320
Brix domain containing protein.
   
 
 0.813
TVAG_027760
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.790
TVAG_113720
Ribosomal protein L5.
    
 
 0.694
TVAG_064640
Ribosomal protein L5.
    
 
 0.694
TVAG_466650
Ribosomal protein L5.
    
 
 0.694
TVAG_044560
60S ribosomal protein L11, putative; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.691
TVAG_271230
60S ribosomal protein L11, putative; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.691
TVAG_434020
Ribosome assembly protein RRB1, putative.
   
  
 0.671
TVAG_172480
Variant SH3 domain containing protein.
    
 
 0.632
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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