STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_362930Lactate dehydrogenase family protein; Belongs to the LDH/MDH superfamily. (339 aa)    
Predicted Functional Partners:
TVAG_268020
Aspartate aminotransferase.
   
 0.930
TVAG_431780
Aminotransferase, classes I and II family protein.
   
 0.930
TVAG_020800
Aspartate aminotransferase.
   
 0.926
TVAG_430210
Aminotransferase, classes I and II family protein.
  
 0.889
TVAG_419720
Aminotransferase, classes I and II family protein.
  
 0.889
TVAG_412220
Malate dehydrogenase:SUBUNIT.
  
 0.887
TVAG_416100
Malate dehydrogenase:SUBUNIT.
  
 0.887
maeB
Hydrogenosomal malic enzyme subunit B proprotein.
  
 0.887
TVAG_462340
PARP catalytic domain-containing protein.
  
 0.853
TVAG_015950
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.853
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.