STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_112230Ribosomal protein L13e, putative. (189 aa)    
Predicted Functional Partners:
TVAG_264670
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
TVAG_393320
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
TVAG_222910
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
TVAG_006170
60S ribosomal protein L19-3, putative.
   
 0.996
TVAG_101690
Ribosomal protein L24e, putative.
   
 0.996
TVAG_083260
Ribosomal protein L22, putative; Belongs to the universal ribosomal protein uL22 family.
   
 0.996
TVAG_015800
60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.
   
 0.995
TVAG_005910
Ribosomal protein L8, putative.
   
 0.995
TVAG_034660
60S ribosomal protein L44, putative.
   
 0.994
TVAG_050420
60S ribosomal protein L39, putative.
   
 0.993
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.