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XP_001328480.1 protein (Trichomonas vaginalis) - STRING interaction network
"XP_001328480.1" - Clan CA, family C2, calpain-like cysteine peptidase in Trichomonas vaginalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_001328480.1Clan CA, family C2, calpain-like cysteine peptidase; Encoded by transcript TVAG_423090A; Identical to- GlimmerHMM gene prediction Covered by- TigrScan gene prediction; Belongs to the peptidase C2 family (1437 aa)    
Predicted Functional Partners:
XP_001308534.1
SNF7 family protein; Encoded by transcript TVAG_459530A; Identical to- TigrScan, GlimmerHMM gene predictions; Belongs to the SNF7 family (204 aa)
     
 
  0.674
XP_001323176.1
C2 domain containing protein; Encoded by transcript TVAG_260390A; Identical to- GlimmerHMM gene prediction Covered by- TigrScan gene prediction (1271 aa)
       
 
  0.613
XP_001580053.1
Actinin, putative; Encoded by transcript TVAG_247460A; Identical to- TigrScan, GlimmerHMM gene predictions (1137 aa)
       
 
  0.612
XP_001580057.1
SNF7 family protein; Encoded by transcript TVAG_247500A; Identical to- TigrScan, GlimmerHMM gene predictions (181 aa)
           
  0.587
XP_001316657.1
SNF7 family protein; Encoded by transcript TVAG_396200A; Identical to- TigrScan, GlimmerHMM gene predictions; Belongs to the SNF7 family (201 aa)
           
  0.572
XP_001324049.1
Zinc finger, C2H2 type family protein; Encoded by transcript TVAG_458980A; Identical to- TigrScan, GlimmerHMM gene predictions (276 aa)
       
 
  0.556
XP_001315918.1
Erythrocyte binding protein, putative; Encoded by transcript TVAG_031940A; Identical to- TigrScan, GlimmerHMM gene predictions (1185 aa)
       
 
  0.556
XP_001308251.1
Flocculin, putative; Encoded by transcript TVAG_032240A; Identical to- TigrScan, GlimmerHMM gene predictions (1737 aa)
       
 
  0.556
XP_001307022.1
Viral A-type inclusion protein, putative; Encoded by transcript TVAG_336550A; Identical to- GlimmerHMM gene prediction Covered by- TigrScan gene prediction (1775 aa)
       
 
  0.556
XP_001301486.1
Uncharacterized protein; Encoded by transcript TVAG_309870A; Identical to- TigrScan, GlimmerHMM gene predictions (449 aa)
       
 
  0.556
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Trichomonas vaginalis, Tritrichomonas vaginalis
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