STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVAG_178470Ankyrin repeat protein, putative. (140 aa)    
Predicted Functional Partners:
TVAG_388670
PCI domain containing protein.
   
 0.736
TVAG_035330
Proteasome endopeptidase complex, putative; Belongs to the AAA ATPase family.
   
 0.710
TVAG_014040
Uncharacterized protein.
    
 0.708
TVAG_405990
Uncharacterized protein.
    
 0.708
TVAG_414000
C2 NT-type domain-containing protein.
    
 0.708
TVAG_468020
26S proteasome non-ATPase regulatory subunit, putative.
   
 0.696
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.691
KATNAL2-2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.691
TVAG_009330
IFT81_CH domain-containing protein.
    
 0.689
TVAG_015750
Clan MP, family M67, Poh1-like metallopeptidase.
   
 0.688
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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