STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
triGTriG conjugal transfer protein. (230 aa)    
Predicted Functional Partners:
virB4
VirB4 conjugal transfer protein; N terminal truncation.
 
 
 0.984
triH
TriH conjugal transfer protein.
 
  
 0.982
triI
TriI conjugal transfer protein.
 
  
 0.949
virB9
VirB9 conjugative transfer protein.
 
  
 0.922
virB10
VirB10 conjugal transfer protein; N terminal truncation; COG2948.
 
  
 0.909
triJ
TriJ conjugal transfer protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
     0.848
taxB
TaxB conjugal transfer protein.
 
   
 0.847
traU
TraU conjugal transfer protein.
  
 
 0.798
virD4
VirD4 conjugal transfer protein; C terminal truncation.
 
   
 0.770
mobB_1
MobB relaxase/mobilization protein.
  
     0.764
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.