Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
mobB_1 | taxB | HDEF_0420 | HDEF_1342 | MobB relaxase/mobilization protein. | TaxB conjugal transfer protein. | 0.583 |
mobB_1 | triG | HDEF_0420 | HDEF_1338 | MobB relaxase/mobilization protein. | TriG conjugal transfer protein. | 0.764 |
mobB_1 | triH | HDEF_0420 | HDEF_1339 | MobB relaxase/mobilization protein. | TriH conjugal transfer protein. | 0.740 |
mobB_1 | triI | HDEF_0420 | HDEF_1340 | MobB relaxase/mobilization protein. | TriI conjugal transfer protein. | 0.737 |
mobB_1 | triJ | HDEF_0420 | HDEF_1341 | MobB relaxase/mobilization protein. | TriJ conjugal transfer protein; Part of the Type IV secretion system. Belongs to the GSP E family. | 0.521 |
mobB_1 | virB10 | HDEF_0420 | HDEF_0417 | MobB relaxase/mobilization protein. | VirB10 conjugal transfer protein; N terminal truncation; COG2948. | 0.944 |
mobB_1 | virB4 | HDEF_0420 | HDEF_0433 | MobB relaxase/mobilization protein. | VirB4 conjugal transfer protein; N terminal truncation. | 0.771 |
mobB_1 | virB9 | HDEF_0420 | HDEF_0419 | MobB relaxase/mobilization protein. | VirB9 conjugative transfer protein. | 0.946 |
mobB_1 | virD4 | HDEF_0420 | HDEF_0414 | MobB relaxase/mobilization protein. | VirD4 conjugal transfer protein; C terminal truncation. | 0.926 |
taxB | mobB_1 | HDEF_1342 | HDEF_0420 | TaxB conjugal transfer protein. | MobB relaxase/mobilization protein. | 0.583 |
taxB | triG | HDEF_1342 | HDEF_1338 | TaxB conjugal transfer protein. | TriG conjugal transfer protein. | 0.847 |
taxB | triH | HDEF_1342 | HDEF_1339 | TaxB conjugal transfer protein. | TriH conjugal transfer protein. | 0.851 |
taxB | triI | HDEF_1342 | HDEF_1340 | TaxB conjugal transfer protein. | TriI conjugal transfer protein. | 0.964 |
taxB | triJ | HDEF_1342 | HDEF_1341 | TaxB conjugal transfer protein. | TriJ conjugal transfer protein; Part of the Type IV secretion system. Belongs to the GSP E family. | 0.934 |
taxB | virB10 | HDEF_1342 | HDEF_0417 | TaxB conjugal transfer protein. | VirB10 conjugal transfer protein; N terminal truncation; COG2948. | 0.855 |
taxB | virB4 | HDEF_1342 | HDEF_0433 | TaxB conjugal transfer protein. | VirB4 conjugal transfer protein; N terminal truncation. | 0.799 |
taxB | virB9 | HDEF_1342 | HDEF_0419 | TaxB conjugal transfer protein. | VirB9 conjugative transfer protein. | 0.783 |
traU | triG | HDEF_0970 | HDEF_1338 | TraU conjugal transfer protein. | TriG conjugal transfer protein. | 0.798 |
traU | triH | HDEF_0970 | HDEF_1339 | TraU conjugal transfer protein. | TriH conjugal transfer protein. | 0.580 |
traU | triI | HDEF_0970 | HDEF_1340 | TraU conjugal transfer protein. | TriI conjugal transfer protein. | 0.610 |
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