STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsdAThiosulfate dehydrogenase; Catalyzes the oxidation of 2 molecules of thiosulfate to tetrathionate. (270 aa)    
Predicted Functional Partners:
ADC61628.1
PFAM: Di-haem cytochrome c peroxidase; KEGG: dsh:Dshi_2655 cytochrome-c peroxidase.
  
 0.842
ADC61731.1
Cytochrome c class I; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.834
soxX
SoxX; KEGG: vok:COSY_0733 sulfur oxidation protein SoxX.
   
 
 0.834
ADC61398.1
KEGG: mgm:Mmc1_0336 transmembrane region and signal peptide prediction.
 
 
 
 0.790
ADC61825.1
KEGG: mpt:Mpe_A2207 hypothetical protein.
   
 
 0.771
ADC60994.1
PFAM: Domain of unknown function DUF1924; KEGG: shm:Shewmr7_3778 cytochrome c-type protein Shp.
   
 
 0.756
ADC63784.1
PFAM: cytochrome c class I; KEGG: mei:Msip34_0250 cytochrome c class I.
 
  
 0.656
ADC61062.1
KEGG: gym:GYMC10_1055 hypothetical protein.
       0.623
ADC62771.1
PFAM: cytochrome c class I; KEGG: mag:amb3083 cytochrome c553.
  
  
 0.600
soxY
SoxY; KEGG: tgr:Tgr7_2221 sulfur oxidation protein SoxY-like protein.
     
 0.539
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.