STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62033.1PFAM: Ankyrin; KEGG: ankyrin repeat protein. (323 aa)    
Predicted Functional Partners:
ADC62183.1
PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: app:CAP2UW1_3783 metallophosphoesterase.
    
 0.899
ADC62790.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; KEGG: sus:Acid_5018 NADH dehydrogenase (quinone).
   
 
 0.859
ADC62434.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: pol:Bpro_3393 AMP-dependent synthetase and ligase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
   
 0.841
ADC63852.1
KEGG: vsp:VS_1367 hypothetical protein.
    
 0.768
ADC62034.1
PFAM: NapC/NirT cytochrome c domain protein; KEGG: rpc:RPC_1875 NapC/NirT cytochrome c-like; Belongs to the NapC/NirT/NrfH family.
 
     0.754
ADC63039.1
PFAM: nuclear protein SET; SMART: nuclear protein SET; KEGG: lch:Lcho_4245 nuclear protein SET.
    
 0.726
petB
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.723
ADC62874.1
PFAM: Methyltransferase type 11; Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dma:DMR_31080 hypothetical protein.
 
 
 0.713
ADC62466.1
PFAM: metallophosphoesterase; KEGG: ace:Acel_0820 metallophosphoesterase.
    
  0.704
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.686
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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