STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsrFDsrF; Not known. Could be involved in the oxidation of intracellular sulfur. (136 aa)    
Predicted Functional Partners:
dsrE
DsrE; Not known. Could be involved in the oxidation of intracellular sulfur; Belongs to the DsrE/TusD family.
 
 0.999
dsrH
DsrH; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: mag:amb3371 hypothetical protein.
 
 0.999
dsrC
DsrC; Part of a sulfur-relay system.
 
 
 0.979
dsrM
DsrM; PFAM: Nitrate reductase gamma subunit; KEGG: tbd:Tbd_2479 putative DsrM protein.
 
   
 0.924
dsrB
DsrB; KEGG: tgr:Tgr7_2186 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
   
 0.920
dsrK
DsrK; KEGG: tgr:Tgr7_2192 reductase, iron-sulfur binding subunit, putative.
 
   
 0.906
dsrJ
DsrJ; KEGG: mag:amb3376 Hdr-like menaquinol oxidoreductase cytochrome c subunit.
 
   
 0.898
dsrA
DsrA; Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.
 
   
 0.889
dsrP
DsrP; PFAM: Polysulphide reductase NrfD; KEGG: tgr:Tgr7_2196 polysulphide reductase NrfD.
 
   
 0.885
dsrL
DsrL; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tgr:Tgr7_2193 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.863
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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