STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC62862.1PFAM: Radical SAM domain protein; KEGG: geo:Geob_1446 radical SAM domain protein. (424 aa)    
Predicted Functional Partners:
ADC62865.1
PFAM: Radical SAM domain protein; KEGG: geo:Geob_1446 radical SAM domain protein.
 
    
0.803
ADC62861.1
PFAM: Radical SAM domain protein; KEGG: lip:LIA015 hypothetical protein.
 
    
0.795
ADC62863.1
PFAM: Radical SAM domain protein; KEGG: geo:Geob_1446 radical SAM domain protein.
 
    
0.794
ADC62864.1
PFAM: glycosyl transferase group 1; KEGG: bhy:BHWA1_02679 glycosyl transferase, group 1-like protein.
       0.773
ADC62860.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pca:Pcar_1128 nucleoside-diphosphate-sugar epimerase/reductase.
 
   
 0.619
ADC62868.1
TIGRFAM: methyltransferase FkbM family; KEGG: rec:RHECIAT_PB0000309 nodulation protein.
 
     0.534
ADC62867.1
PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cma:Cmaq_1100 radical SAM domain-containing protein.
  
  
 0.506
ADC62337.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.495
ADC62111.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: hha:Hhal_0066 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
     
 0.476
ADC62866.1
Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); KEGG: msl:Msil_1841 short-chain dehydrogenase/reductase SDR.
     
 0.462
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.