STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipHigh potential iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family. (122 aa)    
Predicted Functional Partners:
pufL
Photosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
 
 0.851
pufM
Photosynthetic reaction center, M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
 
 0.850
ADC63546.1
TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; PRC-barrel domain protein; KEGG: rpd:RPD_3730 photosynthetic reaction center subunit H.
    
   0.800
ADC63628.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: dma:DMR_36450 hypothetical protein.
  
     0.668
fdx
4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
      
 0.641
ADC61121.1
PFAM: conserved hypothetical protein; KEGG: ote:Oter_4023 Rossmann fold nucleotide-binding protein-like protein.
  
     0.639
ADC62244.1
KEGG: pnu:Pnuc_1628 hypothetical protein.
  
     0.629
ADC61635.1
KEGG: psa:PST_1097 hypothetical protein.
  
     0.627
ADC62389.1
KEGG: gur:Gura_0672 hypothetical protein.
  
     0.605
ADC61075.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ppw:PputW619_0158 rubredoxin-type Fe(Cys)4 protein.
      
 0.575
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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