STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63348.1KEGG: xac:XAC4299 hypothetical protein. (1124 aa)    
Predicted Functional Partners:
ADC63346.1
KEGG: tmz:Tmz1t_3164 hypothetical protein.
 
   0.993
ADC63347.1
KEGG: tmz:Tmz1t_3163 hypothetical protein.
 
 
   0.982
ADC63349.1
PFAM: conserved hypothetical protein; KEGG: tmz:Tmz1t_3161 hypothetical protein.
 
     0.957
ADC62487.1
PFAM: MscS Mechanosensitive ion channel; KEGG: noc:Noc_2151 MscS mechanosensitive ion channel.
   
   0.758
ADC63926.1
PFAM: Peptidase M23; KEGG: hha:Hhal_1211 fis family transcriptional regulator.
   
   0.755
ADC63350.1
KEGG: dol:Dole_2701 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: cation transporting ATPase domain protein.
       0.610
ADC61231.1
PFAM: Peptidase M10 serralysin; Hemolysin-type calcium-binding region; KEGG: cph:Cpha266_2326 hemolysin-type calcium-binding region.
  
     0.401
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.