STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63534.1Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (445 aa)    
Predicted Functional Partners:
ADC61218.1
PFAM: thioesterase superfamily protein; KEGG: mac:MA0735 phenylacetic acid degradation protein.
 
 
 0.975
ADC63536.1
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 
0.958
ADC63535.1
PFAM: amino acid-binding ACT domain protein; KEGG: ank:AnaeK_0041 amino acid-binding ACT domain protein.
 
   0.946
ADC63532.1
Thiamine pyrophosphate protein domain protein TPP-binding protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.808
ADC63533.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: afw:Anae109_0042 pyruvate ferredoxin/flavodoxin oxidoreductase.
 
  
 0.789
ADC62111.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: hha:Hhal_0066 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.543
ADC61229.1
KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; Pyruvate/ketoisovalerate oxidoreductase; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain.
  
  
 0.516
ADC63537.1
KEGG: sfu:Sfum_1927 hypothetical protein.
       0.495
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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