STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC63660.1PFAM: ribulose bisphosphate carboxylase small chain; KEGG: bbt:BBta_0452 ribulose 1,5-bisphosphate carboxylase small subunit. (119 aa)    
Predicted Functional Partners:
cbbL2
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
  
 0.981
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
 0.968
ADC63455.1
Ribulose-bisphosphate carboxylase; May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity (By similarity). Belongs to the RuBisCO large chain family. Type IV subfamily.
  
 0.968
cbbS2
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
    
  0.933
ADC61512.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: tgr:Tgr7_3240 phosphoribulokinase.
  
 
 0.916
pgk
PFAM: phosphoglycerate kinase; KEGG: tbd:Tbd_0161 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.909
cbbZ
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.903
ADC61677.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: azo:azo1615 hydrolase.
    
 0.903
ADC62301.1
PFAM: ribulose bisphosphate carboxylase small chain; KEGG: mca:MCA2744 ribulose bisphosphate carboxylase, small subunit.
     
  0.900
ADC61208.1
PFAM: carbonic anhydrase; KEGG: mms:mma_2596 carbonic anhydrase.
    
 
 0.668
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
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