STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82553.1COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: fnu:FN0314 caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase family 3; SPTR: C3WB74 Caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase. (211 aa)    
Predicted Functional Partners:
ADO83042.1
Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: fnu:FN1826 protease; PFAM: peptidase U32; SPTR: C6JJU9 Protease; PFAM: Peptidase family U32.
 
  
 0.793
ADO82552.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
    0.791
ADO82003.1
Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: fnu:FN1931 protease; PFAM: peptidase U32; SPTR: C6JQ35 Protease; PFAM: Collagenase; Peptidase family U32.
 
  
 0.557
ADO82551.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR018490:IPR014710; KEGG: cbk:CLL_A1560 cNMP-binding regulatory protein; PFAM: cyclic nucleotide-binding; SPTR: B0ABB5 Putative uncharacterized protein; PFAM: Cyclic nucleotide-binding domain.
  
  
 0.524
ADO81986.1
Heptaprenyl diphosphate synthase component I; COGs: COG4769 membrane protein; InterPro IPR014535:IPR010898; KEGG: fnu:FN0367 integral membrane protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: C6JL18 Trans-hexaprenyltranstransferase; PFAM: Heptaprenyl diphosphate synthase component I.
  
     0.477
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
    0.454
ADO82554.1
Hypothetical protein; KEGG: cps:CPS_2645 TonB domain-containing protein; SPTR: C3X4S3 Metallo-beta-lactamase superfamily protein.
       0.407
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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